Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sediminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sediminicola
Accession NumberCP178916.1
Gene Summary
Adenine Count
510747 bp
Thymine Count
512278 bp
Guanine Count
866983 bp
Cytosine Count
866574 bp
Genome Length
2756582 bp
Protein-coding Genes
2791 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| beta-ketoacyl-acp synthase ii | ACMC5O_000652 | P56902 | + | 611767 - 613026 | 43984.4 |
| endolytic transglycosylase mltg | ACMC5O_000653 | P44720 | + | 613026 - 613994 | 34852.6 |
| hypothetical protein | ACMC5O_000654 | Not Available | - | 613995 - 614390 | 13893.9 |
| marr family winged helix-turn-helix transcriptional regulator | ACMC5O_000655 | P70993 | - | 614299 - 614646 | 13001.9 |
| leucyl aminopeptidase family protein | ACMC5O_000656 | Q3A831 | - | 614782 - 616194 | 50762.8 |
| pilz domain-containing protein | ACMC5O_000657 | Not Available | + | 616304 - 616762 | 16460.5 |
| 30s ribosomal protein s12 methylthiotransferase rimo | ACMC5O_000658 | Q1GV83 | - | 616759 - 618156 | 51293.2 |
| hypothetical protein | ACMC5O_000659 | Not Available | - | 618202 - 618534 | 12225.3 |
| isochorismatase family protein | ACMC5O_000660 | D4GWH7 | - | 618571 - 619140 | 20356.4 |
| udp-glucose/gdp-mannose dehydrogenase family protein | ACMC5O_000661 | O54068 | + | 619284 - 620597 | 46858.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.