Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sediminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sediminicola
Accession NumberCP178916.1
Gene Summary
Adenine Count
510747 bp
Thymine Count
512278 bp
Guanine Count
866983 bp
Cytosine Count
866574 bp
Genome Length
2756582 bp
Protein-coding Genes
2791 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lyttr family dna-binding domain-containing protein | ACMC5O_000612 | Q2RNI6 | + | 576050 - 576811 | 27272.6 |
| phosphocholine cytidylyltransferase family protein | ACMC5O_000613 | O67379 | - | 577102 - 577851 | 27273.3 |
| p-ii family nitrogen regulator | ACMC5O_000614 | Q53044 | + | 577944 - 578282 | 12209.8 |
| helix-turn-helix domain-containing protein | ACMC5O_000615 | Not Available | + | 578326 - 578550 | 8164.05 |
| hypothetical protein | ACMC5O_000616 | Not Available | - | 578547 - 578720 | 6470.59 |
| hypothetical protein | ACMC5O_000617 | Not Available | - | 578847 - 579023 | 6704.03 |
| marr family transcriptional regulator | ACMC5O_000618 | B2U2E2 | + | 579203 - 579646 | 16819.2 |
| hlyd family secretion protein | ACMC5O_000619 | P44928 | + | 579643 - 580725 | 38291.8 |
| dha2 family efflux mfs transporter permease subunit | ACMC5O_000620 | P0AEJ1 | + | 580727 - 582274 | 55230.1 |
| hypothetical protein | ACMC5O_000621 | Not Available | + | 582341 - 582976 | 23412.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.