Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sediminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sediminicola
Accession NumberCP178916.1
Gene Summary
Adenine Count
510747 bp
Thymine Count
512278 bp
Guanine Count
866983 bp
Cytosine Count
866574 bp
Genome Length
2756582 bp
Protein-coding Genes
2791 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tpm domain-containing protein | ACMC5O_000482 | Not Available | + | 454865 - 455542 | 24790.5 |
| nudix hydrolase | ACMC5O_000483 | Q8KP10 | + | 455539 - 456054 | 19005.8 |
| m3 family metallopeptidase | ACMC5O_000484 | P24171 | + | 456180 - 458345 | 80290.0 |
| elm1/gtroc1 family putative glycosyltransferase | ACMC5O_000485 | Q93YN4 | - | 458358 - 460451 | 76339.6 |
| asparagine synthase (glutamine-hydrolyzing) | ACMC5O_000486 | P54420 | - | 460444 - 462366 | 71654.0 |
| hypothetical protein | ACMC5O_000487 | Not Available | + | 462602 - 462760 | 5495.47 |
| superoxide dismutase family protein | ACMC5O_000488 | P20379 | + | 462804 - 463331 | 17547.9 |
| methyltransferase domain-containing protein | ACMC5O_000489 | Q8CWG0 | - | 463338 - 463988 | 23858.1 |
| hypothetical protein | ACMC5O_000490 | Not Available | - | 463985 - 464638 | 23866.5 |
| sdr family nad(p)-dependent oxidoreductase | ACMC5O_000491 | P37694 | - | 464659 - 465414 | 27074.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.