Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sediminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sediminicola
Accession NumberCP178916.1
Gene Summary
Adenine Count
510747 bp
Thymine Count
512278 bp
Guanine Count
866983 bp
Cytosine Count
866574 bp
Genome Length
2756582 bp
Protein-coding Genes
2791 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lon peptidase substrate-binding domain-containing protein | ACMC5O_002622 | P36774 | + | 2522705 - 2523268 | 20764.7 |
| ubih/ubif/visc/coq6 family ubiquinone biosynthesis hydroxylase | ACMC5O_002623 | Q2RMZ4 | - | 2523269 - 2524483 | 43171.8 |
| dna translocase ftsk 4tm domain-containing protein | ACMC5O_002624 | Q8YJB8 | + | 2524584 - 2526917 | 83458.7 |
| outer membrane lipoprotein carrier protein lola | ACMC5O_002625 | Q7NXL2 | + | 2527013 - 2527624 | 22396.0 |
| exodeoxyribonuclease iii | ACMC5O_002626 | P44318 | + | 2527841 - 2528635 | 30599.5 |
| gtp cyclohydrolase ii | ACMC5O_002627 | P43525 | + | 2528632 - 2529690 | 37420.0 |
| magnesium transporter | ACMC5O_002628 | Q830V1 | - | 2529695 - 2531110 | 51037.4 |
| peptidylprolyl isomerase | ACMC5O_002629 | Q8YHB5 | + | 2531227 - 2531691 | 16758.8 |
| sdr family oxidoreductase | ACMC5O_002630 | P54554 | + | 2531696 - 2532457 | 27231.1 |
| cdc48 family aaa atpase | ACMC5O_002631 | O28972 | + | 2532548 - 2534866 | 84372.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.