Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sediminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sediminicola
Accession NumberCP178916.1
Gene Summary
Adenine Count
510747 bp
Thymine Count
512278 bp
Guanine Count
866983 bp
Cytosine Count
866574 bp
Genome Length
2756582 bp
Protein-coding Genes
2791 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase iii subunit epsilon | ACMC5O_002562 | Q1RJM1 | - | 2465372 - 2466070 | 25634.9 |
| dephospho-coa kinase | ACMC5O_002563 | P58100 | - | 2466078 - 2466683 | 21760.4 |
| nucleoside triphosphate pyrophosphatase | ACMC5O_002564 | Q2GC58 | - | 2466715 - 2467293 | 21193.5 |
| uroporphyrinogen decarboxylase | ACMC5O_002565 | A5VA70 | + | 2467641 - 2468654 | 36535.0 |
| copd family protein | ACMC5O_002566 | Q53229 | + | 2468651 - 2469103 | 16887.0 |
| transcription termination factor rho | ACMC5O_002567 | P52156 | + | 2469284 - 2470540 | 46220.9 |
| yjbe family putative metal transport protein | ACMC5O_002568 | O31603 | + | 2470566 - 2471228 | 23686.5 |
| yjbe family putative metal transport protein | ACMC5O_002569 | O31603 | + | 2471312 - 2472028 | 25180.4 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | ACMC5O_002570 | Q2N6I9 | + | 2472056 - 2473336 | 45164.6 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis enzyme mnmg | ACMC5O_002571 | Q2GC38 | + | 2473409 - 2475085 | 60925.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.