Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sediminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sediminicola
Accession NumberCP178916.1
Gene Summary
Adenine Count
510747 bp
Thymine Count
512278 bp
Guanine Count
866983 bp
Cytosine Count
866574 bp
Genome Length
2756582 bp
Protein-coding Genes
2791 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| pbp1a family penicillin-binding protein | ACMC5O_002552 | O66874 | + | 2458129 - 2460279 | 77128.0 |
| sprt family zinc-dependent metalloprotease | ACMC5O_002553 | Not Available | - | 2460226 - 2460945 | 26921.8 |
| ycgn family cysteine cluster protein | ACMC5O_002554 | A5VA56 | - | 2460923 - 2461387 | 17637.8 |
| ankyrin repeat domain-containing protein | ACMC5O_002555 | Not Available | + | 2461439 - 2462038 | 21173.5 |
| mmcb family dna repair protein | ACMC5O_002556 | Not Available | - | 2462040 - 2462522 | 17817.6 |
| cell wall hydrolase | ACMC5O_002557 | P0A3V1 | - | 2462565 - 2463143 | 20750.5 |
| duf1491 family protein | ACMC5O_002558 | Not Available | - | 2463403 - 2463747 | 13007.4 |
| paai family thioesterase | ACMC5O_002559 | Q97YR6 | - | 2463744 - 2464223 | 17623.8 |
| pts sugar transporter subunit iia | ACMC5O_002560 | P30335 | - | 2464204 - 2464668 | 16418.8 |
| ribosome-associated translation inhibitor raia | ACMC5O_002561 | P17265 | - | 2464734 - 2465306 | 20734.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.