Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sediminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sediminicola
Accession NumberCP178916.1
Gene Summary
Adenine Count
510747 bp
Thymine Count
512278 bp
Guanine Count
866983 bp
Cytosine Count
866574 bp
Genome Length
2756582 bp
Protein-coding Genes
2791 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l20 | ACMC5O_002532 | A5V924 | + | 2438466 - 2438840 | 13994.2 |
| hypothetical protein | ACMC5O_002533 | Not Available | - | 2438907 - 2439716 | 28627.1 |
| malate synthase a | ACMC5O_002534 | P95329 | - | 2439768 - 2441336 | 58791.8 |
| hypothetical protein | ACMC5O_002535 | Not Available | - | 2441333 - 2441530 | 7638.9 |
| isocitrate lyase | ACMC5O_002536 | Q9K9H0 | - | 2441541 - 2442821 | 46423.9 |
| short-chain fatty acyl-coa regulator family protein | ACMC5O_002537 | P9WMI0 | + | 2442943 - 2444367 | 52565.0 |
| duf5996 family protein | ACMC5O_002538 | Not Available | - | 2444364 - 2445275 | 33461.3 |
| phenylalanine--trna ligase subunit alpha | ACMC5O_002539 | A5V922 | + | 2445335 - 2446402 | 39208.7 |
| phenylalanine--trna ligase subunit beta | ACMC5O_002540 | Q2GAI7 | + | 2446399 - 2448753 | 84054.2 |
| lysophospholipid acyltransferase family protein | ACMC5O_002541 | Q95JH2 | - | 2448730 - 2449428 | 25183.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.