Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sediminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sediminicola
Accession NumberCP178916.1
Gene Summary
Adenine Count
510747 bp
Thymine Count
512278 bp
Guanine Count
866983 bp
Cytosine Count
866574 bp
Genome Length
2756582 bp
Protein-coding Genes
2791 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta hydrolase | ACMC5O_002492 | O05691 | - | 2400715 - 2401545 | 30032.5 |
| sdr family oxidoreductase | ACMC5O_002493 | P0A2D2 | - | 2401622 - 2402428 | 27735.3 |
| nuclear transport factor 2 family protein | ACMC5O_002494 | Not Available | - | 2402434 - 2402763 | 11928.0 |
| lysr family transcriptional regulator | ACMC5O_002495 | P75836 | + | 2402882 - 2403781 | 32578.4 |
| dna topoisomerase (atp-hydrolyzing) subunit b | ACMC5O_002496 | P0CAX1 | - | 2404142 - 2406637 | 91594.9 |
| m20/m25/m40 family metallo-hydrolase | ACMC5O_002497 | Q55FR8 | + | 2406825 - 2408222 | 50191.7 |
| dead/deah box helicase | ACMC5O_002498 | P25888 | - | 2408219 - 2409691 | 53875.1 |
| dna replication/repair protein recf | ACMC5O_002499 | A5VA37 | - | 2409877 - 2410935 | 37729.9 |
| hypothetical protein | ACMC5O_002500 | Not Available | - | 2410953 - 2411273 | 12133.5 |
| dna polymerase iii subunit beta | ACMC5O_002501 | P0CAU5 | - | 2411270 - 2412373 | 39944.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.