Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sediminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sediminicola
Accession NumberCP178916.1
Gene Summary
Adenine Count
510747 bp
Thymine Count
512278 bp
Guanine Count
866983 bp
Cytosine Count
866574 bp
Genome Length
2756582 bp
Protein-coding Genes
2791 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| spfh domain-containing protein | ACMC5O_002442 | Q89A39 | - | 2355208 - 2356107 | 33006.2 |
| isoaspartyl peptidase/l-asparaginase | ACMC5O_002443 | Q7CQV5 | + | 2356215 - 2357138 | 32136.8 |
| gnat family n-acetyltransferase | ACMC5O_002444 | Not Available | - | 2357114 - 2358253 | 42415.1 |
| glycerophosphodiester phosphodiesterase family protein | ACMC5O_002445 | O07592 | - | 2358240 - 2358950 | 26121.4 |
| rida family protein | ACMC5O_002446 | O96876 | - | 2358925 - 2359386 | 15903.3 |
| sdr family nad(p)-dependent oxidoreductase | ACMC5O_002447 | Q9KWN1 | - | 2359419 - 2360165 | 27058.5 |
| had family hydrolase | ACMC5O_002448 | Not Available | - | 2360162 - 2360779 | 22896.7 |
| duf3572 family protein | ACMC5O_002449 | Not Available | - | 2360776 - 2361042 | 9557.36 |
| response regulator | ACMC5O_002450 | B2SB45 | + | 2361083 - 2361472 | 13945.8 |
| 50s ribosomal protein l33 | ACMC5O_002451 | Q2G3F0 | - | 2361488 - 2361655 | 6433.91 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.