Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sediminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sediminicola
Accession NumberCP178916.1
Gene Summary
Adenine Count
510747 bp
Thymine Count
512278 bp
Guanine Count
866983 bp
Cytosine Count
866574 bp
Genome Length
2756582 bp
Protein-coding Genes
2791 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| multidrug efflux smr transporter | ACMC5O_002432 | Q7MZY0 | - | 2346650 - 2346979 | 11656.6 |
| duf1345 domain-containing protein | ACMC5O_002433 | Not Available | + | 2347024 - 2347656 | 22927.4 |
| dmt family transporter | ACMC5O_002434 | A0A0H2ZHZ4 | - | 2347653 - 2348558 | 32002.1 |
| tigr02281 family clan aa aspartic protease | ACMC5O_002435 | Q9ZC99 | - | 2348585 - 2349061 | 16967.4 |
| hypothetical protein | ACMC5O_002436 | Not Available | - | 2349124 - 2349252 | 4277.21 |
| flavodoxin-dependent (e)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase | ACMC5O_002437 | Q5NR50 | - | 2349294 - 2350427 | 40133.0 |
| tir domain-containing protein | ACMC5O_002438 | G8SD34 | + | 2350537 - 2352717 | 79599.8 |
| hypothetical protein | ACMC5O_002439 | Not Available | + | 2352744 - 2353142 | 14843.3 |
| hypothetical protein | ACMC5O_002440 | Not Available | + | 2353197 - 2354996 | 66578.8 |
| toxin-antitoxin system hicb family antitoxin | ACMC5O_002441 | Not Available | - | 2355001 - 2355201 | 7226.82 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.