Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sediminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sediminicola
Accession NumberCP178916.1
Gene Summary
Adenine Count
510747 bp
Thymine Count
512278 bp
Guanine Count
866983 bp
Cytosine Count
866574 bp
Genome Length
2756582 bp
Protein-coding Genes
2791 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| histidine ammonia-lyase | ACMC5O_002402 | Q0AP92 | - | 2316882 - 2318390 | 52600.6 |
| urocanate hydratase | ACMC5O_002403 | A5VFA2 | - | 2318387 - 2320048 | 60801.5 |
| imidazolonepropionase | ACMC5O_002404 | B8II09 | - | 2320045 - 2321256 | 42691.8 |
| arginase family protein | ACMC5O_002405 | Q9KBE3 | + | 2321297 - 2322178 | 30680.8 |
| alpha-ketoglutarate-dependent dioxygenase alkb | ACMC5O_002406 | Q8RWY1 | - | 2322163 - 2322750 | 22484.5 |
| atp-dependent dna ligase | ACMC5O_002407 | A0R5T2 | - | 2322750 - 2323772 | 38257.5 |
| ammonium transporter | ACMC5O_002408 | P69680 | + | 2323848 - 2325092 | 42423.3 |
| sdr family oxidoreductase | ACMC5O_002409 | Q49117 | - | 2325099 - 2325866 | 26747.9 |
| Trna-met | Not Available | Not Available | + | 2325967 - 2326043 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | + | 2326129 - 2326243 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.