Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sediminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sediminicola
Accession NumberCP178916.1
Gene Summary
Adenine Count
510747 bp
Thymine Count
512278 bp
Guanine Count
866983 bp
Cytosine Count
866574 bp
Genome Length
2756582 bp
Protein-coding Genes
2791 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ACMC5O_002322 | Not Available | + | 2229132 - 2229263 | 5016.37 |
| cytochrome c oxidase assembly protein | ACMC5O_002323 | Q92RG6 | + | 2229260 - 2229805 | 19940.1 |
| cytochrome c oxidase subunit 3 | ACMC5O_002324 | P26858 | + | 2229841 - 2230671 | 30928.7 |
| duf983 domain-containing protein | ACMC5O_002325 | Not Available | + | 2230679 - 2231035 | 12959.0 |
| surf1 family protein | ACMC5O_002326 | Not Available | + | 2231032 - 2231628 | 21071.9 |
| pitrilysin family protein | ACMC5O_002327 | O86835 | + | 2231637 - 2232854 | 43324.6 |
| class i sam-dependent methyltransferase | ACMC5O_002328 | B4RZ48 | + | 2232851 - 2233708 | 31828.0 |
| heme exporter protein ccmb | ACMC5O_002329 | P29960 | - | 2233705 - 2234343 | 21373.8 |
| heme abc exporter atp-binding protein ccma | ACMC5O_002330 | Q1GS38 | - | 2234340 - 2234891 | 19355.7 |
| metallopeptidase family protein | ACMC5O_002331 | Not Available | - | 2234888 - 2235286 | 14832.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.