Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sediminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sediminicola
Accession NumberCP178916.1
Gene Summary
Adenine Count
510747 bp
Thymine Count
512278 bp
Guanine Count
866983 bp
Cytosine Count
866574 bp
Genome Length
2756582 bp
Protein-coding Genes
2791 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ACMC5O_002302 | Not Available | - | 2210710 - 2210955 | 9046.72 |
| pilz domain-containing protein | ACMC5O_002303 | Not Available | - | 2211094 - 2211408 | 11602.9 |
| l,d-transpeptidase family protein | ACMC5O_002304 | P22525 | + | 2211928 - 2213307 | 49355.4 |
| alpha/beta family hydrolase | ACMC5O_002305 | Q3ZC52 | - | 2213323 - 2213985 | 23059.9 |
| murein l,d-transpeptidase catalytic domain family protein | ACMC5O_002306 | Not Available | - | 2214092 - 2214772 | 24399.9 |
| 30s ribosomal protein s21 | ACMC5O_002307 | Q5NLS3 | + | 2215023 - 2215229 | 8301.18 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | ACMC5O_002308 | Q9JYI8 | + | 2215263 - 2215808 | 18930.7 |
| ai-2e family transporter | ACMC5O_002309 | O32095 | - | 2215805 - 2216908 | 39245.6 |
| signal peptidase i | ACMC5O_002310 | A8GYE1 | - | 2216912 - 2217790 | 31991.1 |
| holo-acp synthase | ACMC5O_002311 | A5VD51 | - | 2217791 - 2218198 | 14636.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.