Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sediminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sediminicola
Accession NumberCP178916.1
Gene Summary
Adenine Count
510747 bp
Thymine Count
512278 bp
Guanine Count
866983 bp
Cytosine Count
866574 bp
Genome Length
2756582 bp
Protein-coding Genes
2791 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cytochrome-c oxidase, cbb3-type subunit ii | ACMC5O_002132 | Not Available | + | 2054828 - 2055559 | 27421.4 |
| cbb3-type cytochrome c oxidase subunit 3 | ACMC5O_002133 | Not Available | + | 2055556 - 2055717 | 5810.84 |
| cytochrome-c oxidase, cbb3-type subunit iii | ACMC5O_002134 | Q3J015 | + | 2055710 - 2056672 | 34386.8 |
| cytochrome c oxidase accessory protein ccog | ACMC5O_002135 | P54932 | + | 2056659 - 2058122 | 55531.5 |
| fixh family protein | ACMC5O_002136 | P18397 | + | 2058127 - 2058570 | 16171.3 |
| heavy metal translocating p-type atpase | ACMC5O_002137 | P18398 | + | 2058567 - 2060696 | 74529.1 |
| cbb3-type cytochrome oxidase assembly protein ccos | ACMC5O_002138 | P18399 | + | 2060693 - 2060851 | 5484.63 |
| hypothetical protein | ACMC5O_002139 | Not Available | + | 2060841 - 2061038 | 6649.96 |
| bifunctional salicylyl-coa 5-hydroxylase/oxidoreductase | ACMC5O_002140 | Q7X281 | - | 2061035 - 2063338 | 85528.1 |
| tetr family transcriptional regulator | ACMC5O_002141 | P0ACT4 | - | 2063505 - 2064077 | 19903.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.