Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sediminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sediminicola
Accession NumberCP178916.1
Gene Summary
Adenine Count
510747 bp
Thymine Count
512278 bp
Guanine Count
866983 bp
Cytosine Count
866574 bp
Genome Length
2756582 bp
Protein-coding Genes
2791 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dihydroorotase | ACMC5O_002102 | Q1GT81 | + | 2023156 - 2024184 | 37973.1 |
| crp/fnr family transcriptional regulator | ACMC5O_002103 | Not Available | - | 2024181 - 2024942 | 26776.0 |
| gfo/idh/moca family oxidoreductase | ACMC5O_002104 | Q53TZ2 | - | 2025040 - 2025969 | 34019.5 |
| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase | ACMC5O_002105 | Q6BF16 | - | 2025969 - 2026598 | 21542.0 |
| 2-dehydro-3-deoxygalactonokinase | ACMC5O_002106 | P31459 | - | 2026595 - 2027482 | 31629.8 |
| family 1 glycosylhydrolase | ACMC5O_002107 | B9K7M5 | + | 2027599 - 2028906 | 50971.1 |
| galactonate dehydratase | ACMC5O_002108 | B2UCA8 | + | 2028903 - 2030042 | 41450.5 |
| hypothetical protein | ACMC5O_002109 | Not Available | - | 2030047 - 2030376 | 12686.8 |
| aldose 1-epimerase | ACMC5O_002110 | P76584 | + | 2030503 - 2031387 | 32417.1 |
| Trna-ser | Not Available | Not Available | + | 2031449 - 2031541 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.