Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sediminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sediminicola
Accession NumberCP178916.1
Gene Summary
Adenine Count
510747 bp
Thymine Count
512278 bp
Guanine Count
866983 bp
Cytosine Count
866574 bp
Genome Length
2756582 bp
Protein-coding Genes
2791 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| isocitrate lyase/phosphoenolpyruvate mutase family protein | ACMC5O_002032 | P9WLN8 | + | 1958635 - 1959396 | 26439.1 |
| polyribonucleotide nucleotidyltransferase | ACMC5O_002033 | A5VCY9 | - | 1959546 - 1961930 | 85812.4 |
| 30s ribosomal protein s15 | ACMC5O_002034 | A5VCY8 | - | 1962095 - 1962364 | 10126.3 |
| trna pseudouridine(55) synthase trub | ACMC5O_002035 | Q5NQ30 | - | 1962382 - 1963263 | 31447.0 |
| thymidine kinase | ACMC5O_002036 | Q2G5F0 | - | 1963263 - 1963883 | 22949.7 |
| hypothetical protein | ACMC5O_002037 | Not Available | - | 1963887 - 1964273 | 13477.5 |
| gnat family protein | ACMC5O_002038 | Not Available | - | 1964270 - 1964806 | 20215.2 |
| 30s ribosome-binding factor rbfa | ACMC5O_002039 | A5VCZ4 | - | 1964803 - 1965195 | 14971.9 |
| translation initiation factor if-2 | ACMC5O_002040 | Q1GVI9 | - | 1965199 - 1967715 | 90847.0 |
| duf448 domain-containing protein | ACMC5O_002041 | P32728 | - | 1967717 - 1968433 | 25492.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.