Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sediminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sediminicola
Accession NumberCP178916.1
Gene Summary
Adenine Count
510747 bp
Thymine Count
512278 bp
Guanine Count
866983 bp
Cytosine Count
866574 bp
Genome Length
2756582 bp
Protein-coding Genes
2791 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| m20/m25/m40 family metallo-hydrolase | ACMC5O_002002 | P43616 | - | 1934747 - 1936252 | 53457.9 |
| hypothetical protein | ACMC5O_002003 | Not Available | + | 1936346 - 1936798 | 16222.4 |
| ligase-associated dna damage response endonuclease pdem | ACMC5O_002004 | Not Available | + | 1936822 - 1937484 | 24150.0 |
| hypothetical protein | ACMC5O_002005 | Not Available | + | 1937541 - 1937744 | 7584.69 |
| Trna-glu | Not Available | Not Available | + | 1937756 - 1937831 | Not Available |
| hypothetical protein | ACMC5O_002007 | Not Available | - | 1937875 - 1938180 | 11357.4 |
| dna-deoxyinosine glycosylase | ACMC5O_002008 | Q46EH7 | - | 1938173 - 1938703 | 19078.9 |
| glycosyltransferase family 1 protein | ACMC5O_002009 | Q8S4F6 | + | 1938754 - 1939923 | 42696.1 |
| padr family transcriptional regulator | ACMC5O_002010 | P64588 | - | 1939924 - 1940550 | 23177.5 |
| replication-associated recombination protein a | ACMC5O_002011 | P39918 | + | 1940649 - 1941977 | 48406.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.