Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sediminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sediminicola
Accession NumberCP178916.1
Gene Summary
Adenine Count
510747 bp
Thymine Count
512278 bp
Guanine Count
866983 bp
Cytosine Count
866574 bp
Genome Length
2756582 bp
Protein-coding Genes
2791 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| holliday junction branch migration dna helicase ruvb | ACMC5O_001982 | A5V881 | + | 1917856 - 1918899 | 37387.9 |
| duf3089 domain-containing protein | ACMC5O_001983 | Not Available | + | 1918896 - 1920062 | 41160.9 |
| helix-turn-helix transcriptional regulator | ACMC5O_001984 | C0H3X9 | - | 1920022 - 1920228 | 7538.32 |
| hypothetical protein | ACMC5O_001985 | Not Available | - | 1920221 - 1920667 | 16255.7 |
| ybgc/fadm family acyl-coa thioesterase | ACMC5O_001986 | P44679 | + | 1920776 - 1921231 | 16930.9 |
| tol-pal system beta propeller repeat protein tolb | ACMC5O_001987 | Q5NR65 | + | 1921231 - 1922535 | 46559.7 |
| ompa family protein | ACMC5O_001988 | P0A3S9 | + | 1922532 - 1923131 | 21768.0 |
| hypothetical protein | ACMC5O_001989 | Not Available | - | 1923128 - 1923427 | 10852.9 |
| pantoate--beta-alanine ligase | ACMC5O_001990 | A5VA26 | - | 1923506 - 1924339 | 29558.6 |
| division plane positioning atpase mipz | ACMC5O_001991 | Q72H90 | + | 1924429 - 1925223 | 29167.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.