Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sediminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sediminicola
Accession NumberCP178916.1
Gene Summary
Adenine Count
510747 bp
Thymine Count
512278 bp
Guanine Count
866983 bp
Cytosine Count
866574 bp
Genome Length
2756582 bp
Protein-coding Genes
2791 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nad(p)h-hydrate dehydratase | ACMC5O_001972 | Q8PBP3 | + | 1909832 - 1910665 | 28488.5 |
| hypothetical protein | ACMC5O_001973 | Not Available | - | 1910662 - 1911948 | 47341.9 |
| pyruvate kinase | ACMC5O_001974 | O05118 | - | 1912013 - 1913476 | 52460.7 |
| duf2312 domain-containing protein | ACMC5O_001975 | Q3STZ0 | + | 1913598 - 1913840 | 9238.11 |
| yebc/pmpr family dna-binding transcriptional regulator | ACMC5O_001976 | Q1GWB2 | + | 1913850 - 1914593 | 26464.8 |
| crossover junction endodeoxyribonuclease ruvc | ACMC5O_001977 | Q5NR76 | + | 1914586 - 1915074 | 16778.4 |
| holliday junction branch migration protein ruva | ACMC5O_001978 | A5V883 | + | 1915087 - 1915680 | 19934.2 |
| l,d-transpeptidase family protein | ACMC5O_001979 | P0AAA0 | + | 1915677 - 1916252 | 20982.8 |
| gfa family protein | ACMC5O_001980 | Q89GX9 | + | 1916249 - 1916650 | 14552.2 |
| membrane dipeptidase | ACMC5O_001981 | E9CV02 | - | 1916654 - 1917775 | 40563.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.