Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sediminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sediminicola
Accession NumberCP178916.1
Gene Summary
Adenine Count
510747 bp
Thymine Count
512278 bp
Guanine Count
866983 bp
Cytosine Count
866574 bp
Genome Length
2756582 bp
Protein-coding Genes
2791 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf1330 domain-containing protein | ACMC5O_001942 | Not Available | - | 1879383 - 1879769 | 13733.5 |
| methylmalonyl-coa mutase | ACMC5O_001943 | Q3J4D7 | - | 1879782 - 1881914 | 77050.5 |
| dienelactone hydrolase family protein | ACMC5O_001944 | Q5J1R3 | - | 1881960 - 1882610 | 22851.2 |
| amp-binding protein | ACMC5O_001945 | Q8GQN9 | - | 1882639 - 1884222 | 57451.6 |
| rida family protein | ACMC5O_001946 | Q9L6B5 | - | 1884219 - 1884611 | 14396.5 |
| acyl-coa dehydrogenase family protein | ACMC5O_001947 | J7TF92 | - | 1884608 - 1885756 | 41146.0 |
| enoyl-coa hydratase family protein | ACMC5O_001948 | P77467 | - | 1885756 - 1886565 | 29149.9 |
| sdr family oxidoreductase | ACMC5O_001949 | P0A5Y5 | - | 1886562 - 1887329 | 26706.2 |
| type 1 glutamine amidotransferase | ACMC5O_001950 | Q09686 | + | 1887390 - 1888067 | 24309.9 |
| s-(hydroxymethyl)glutathione dehydrogenase/class iii alcohol dehydrogenase | ACMC5O_001951 | P45382 | + | 1888099 - 1889211 | 39568.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.