Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sediminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sediminicola
Accession NumberCP178916.1
Gene Summary
Adenine Count
510747 bp
Thymine Count
512278 bp
Guanine Count
866983 bp
Cytosine Count
866574 bp
Genome Length
2756582 bp
Protein-coding Genes
2791 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| protein-l-isoaspartate(d-aspartate) o-methyltransferase | ACMC5O_001892 | Q12A85 | - | 1834479 - 1835183 | 26020.6 |
| adenylosuccinate synthase | ACMC5O_001893 | A5VFF3 | + | 1835300 - 1836589 | 46481.7 |
| acylphosphatase | ACMC5O_001894 | Q7NE87 | - | 1836586 - 1836861 | 9872.64 |
| enoyl-acp reductase fabi | ACMC5O_001895 | P58380 | - | 1836861 - 1837664 | 28813.8 |
| yihy/virulence factor brkb family protein | ACMC5O_001896 | O34437 | - | 1837661 - 1838641 | 35572.1 |
| j domain-containing protein | ACMC5O_001897 | A3DF24 | - | 1838705 - 1839640 | 32641.6 |
| pyridoxamine 5'-phosphate oxidase | ACMC5O_001898 | Q1GVE7 | + | 1839720 - 1840301 | 22084.6 |
| cation diffusion facilitator family transporter | ACMC5O_001899 | B7LVD0 | + | 1840298 - 1841260 | 35044.1 |
| phzf family phenazine biosynthesis protein | ACMC5O_001900 | Q9I073 | + | 1841257 - 1842042 | 28356.9 |
| apc family permease | ACMC5O_001901 | P9WQM2 | + | 1842039 - 1843307 | 43875.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.