Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sediminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sediminicola
Accession NumberCP178916.1
Gene Summary
Adenine Count
510747 bp
Thymine Count
512278 bp
Guanine Count
866983 bp
Cytosine Count
866574 bp
Genome Length
2756582 bp
Protein-coding Genes
2791 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| heat shock protein hspq | ACMC5O_001862 | Q6D6C5 | + | 1804133 - 1804483 | 13430.5 |
| 50s ribosomal protein l21 | ACMC5O_001863 | A5VD70 | + | 1804596 - 1805099 | 17392.2 |
| 50s ribosomal protein l27 | ACMC5O_001864 | C3M9X6 | + | 1805134 - 1805406 | 9710.61 |
| gnat family n-acetyltransferase | ACMC5O_001865 | P05332 | + | 1805583 - 1806122 | 19436.5 |
| 2og-fe(ii) oxygenase | ACMC5O_001866 | P9WLH6 | - | 1806119 - 1806823 | 26108.3 |
| metal-dependent hydrolase | ACMC5O_001867 | Not Available | - | 1806880 - 1807758 | 33225.6 |
| helix-turn-helix domain-containing protein | ACMC5O_001868 | Not Available | + | 1807786 - 1808376 | 20990.2 |
| gtpase obge | ACMC5O_001869 | A5VD74 | + | 1808414 - 1809457 | 36959.8 |
| nad(p)-dependent oxidoreductase | ACMC5O_001870 | A0A0H3C8X7 | + | 1809454 - 1810359 | 32520.8 |
| hypothetical protein | ACMC5O_001871 | Not Available | + | 1810480 - 1810617 | 4843.21 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.