Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sediminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sediminicola
Accession NumberCP178916.1
Gene Summary
Adenine Count
510747 bp
Thymine Count
512278 bp
Guanine Count
866983 bp
Cytosine Count
866574 bp
Genome Length
2756582 bp
Protein-coding Genes
2791 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| thymidine phosphorylase family protein | ACMC5O_001802 | Q11BH8 | + | 1749563 - 1751077 | 53083.6 |
| phosphoenolpyruvate synthase | ACMC5O_001803 | Q55905 | - | 1751061 - 1753469 | 86145.0 |
| efflux rnd transporter periplasmic adaptor subunit | ACMC5O_001804 | O31710 | - | 1753531 - 1754739 | 43245.1 |
| ftsx-like permease family protein | ACMC5O_001805 | Not Available | - | 1754736 - 1757099 | 84941.0 |
| abc transporter atp-binding protein | ACMC5O_001806 | Q58206 | - | 1757096 - 1757845 | 27222.3 |
| alpha/beta family hydrolase | ACMC5O_001807 | P9WHK0 | - | 1757918 - 1759246 | 47585.5 |
| pyridoxamine 5'-phosphate oxidase family protein | ACMC5O_001808 | Not Available | - | 1759321 - 1759791 | 17171.3 |
| mbl fold metallo-hydrolase | ACMC5O_001809 | Q5SLP1 | - | 1759788 - 1761161 | 50224.3 |
| l,d-transpeptidase | ACMC5O_001810 | Not Available | - | 1761164 - 1762168 | 35389.4 |
| hypothetical protein | ACMC5O_001811 | Not Available | + | 1762311 - 1762898 | 22331.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.