Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sediminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sediminicola
Accession NumberCP178916.1
Gene Summary
Adenine Count
510747 bp
Thymine Count
512278 bp
Guanine Count
866983 bp
Cytosine Count
866574 bp
Genome Length
2756582 bp
Protein-coding Genes
2791 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cpsd/capb family tyrosine-protein kinase | ACMC5O_001762 | O52788 | - | 1711493 - 1712293 | 28921.6 |
| lipopolysaccharide biosynthesis protein | ACMC5O_001763 | Not Available | - | 1712325 - 1713749 | 51597.1 |
| hypothetical protein | ACMC5O_001764 | Not Available | - | 1713746 - 1714993 | 44976.9 |
| hypothetical protein | ACMC5O_001765 | Not Available | - | 1714993 - 1715286 | 10270.4 |
| polysaccharide biosynthesis/export family protein | ACMC5O_001766 | Not Available | - | 1715283 - 1715603 | 11806.3 |
| hypothetical protein | ACMC5O_001767 | Q9WX71 | + | 1715866 - 1717140 | 46191.7 |
| exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase | ACMC5O_001768 | Q44576 | + | 1717140 - 1718630 | 55080.8 |
| wecb/taga/cpsf family glycosyltransferase | ACMC5O_001769 | B4F1W8 | + | 1718620 - 1719372 | 28012.3 |
| cell wall hydrolase | ACMC5O_001770 | Q9KCE0 | + | 1719369 - 1720457 | 38635.1 |
| duf1996 domain-containing protein | ACMC5O_001771 | Not Available | + | 1720570 - 1721832 | 45078.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.