Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sediminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sediminicola
Accession NumberCP178916.1
Gene Summary
Adenine Count
510747 bp
Thymine Count
512278 bp
Guanine Count
866983 bp
Cytosine Count
866574 bp
Genome Length
2756582 bp
Protein-coding Genes
2791 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rlme family rna methyltransferase | ACMC5O_001732 | A5VFI9 | - | 1681826 - 1682473 | 23606.5 |
| ppx/gppa phosphatase family protein | ACMC5O_001733 | P0A270 | - | 1682470 - 1683534 | 38037.6 |
| Trna-gln | Not Available | Not Available | + | 1683694 - 1683767 | Not Available |
| p-type dna transfer atpase virb11 | ACMC5O_001735 | Q6FYW0 | - | 1683778 - 1684788 | 36349.5 |
| trbi/virb10 family protein | ACMC5O_001736 | Q6G2B2 | - | 1684785 - 1685867 | 36348.6 |
| trbg/virb9 family p-type conjugative transfer protein | ACMC5O_001737 | Q7VSX5 | - | 1685869 - 1686651 | 28235.9 |
| type iv secretion system protein | ACMC5O_001738 | Q9RND2 | - | 1686648 - 1687835 | 40539.4 |
| virb4 family type iv secretion/conjugal transfer atpase | ACMC5O_001739 | Q9R2W4 | - | 1687832 - 1690234 | 88782.3 |
| virb3 family type iv secretion system protein | ACMC5O_001740 | Q9S3N1 | - | 1690245 - 1690517 | 10387.9 |
| trbc/virb2 family protein | ACMC5O_001741 | Q9ZDX2 | - | 1690523 - 1690783 | 8553.61 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.