Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sediminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sediminicola
Accession NumberCP178916.1
Gene Summary
Adenine Count
510747 bp
Thymine Count
512278 bp
Guanine Count
866983 bp
Cytosine Count
866574 bp
Genome Length
2756582 bp
Protein-coding Genes
2791 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| fasciclin domain-containing protein | ACMC5O_001512 | P74615 | + | 1466450 - 1466980 | 17981.6 |
| cyclopropane-fatty-acyl-phospholipid synthase family protein | ACMC5O_001513 | O53732 | - | 1467021 - 1468268 | 46245.0 |
| metal-dependent hydrolase | ACMC5O_001514 | O31583 | - | 1468279 - 1469268 | 36495.5 |
| 2-oxoacid:ferredoxin oxidoreductase subunit beta | ACMC5O_001515 | O53181 | - | 1469283 - 1470293 | 36548.8 |
| 2-oxoacid:acceptor oxidoreductase subunit alpha | ACMC5O_001516 | O53182 | - | 1470367 - 1472244 | 66437.4 |
| rna pyrophosphohydrolase | ACMC5O_001517 | Q16BL5 | + | 1472343 - 1472816 | 18482.7 |
| sensor histidine kinase | ACMC5O_001518 | A6X554 | + | 1473098 - 1473952 | 31079.6 |
| lysr substrate-binding domain-containing protein | ACMC5O_001519 | P16931 | - | 1474102 - 1474980 | 32384.6 |
| proton-conducting transporter membrane subunit | ACMC5O_001520 | D0KZ79 | + | 1475052 - 1476389 | 46153.8 |
| duf2309 domain-containing protein | ACMC5O_001521 | Q2G5G2 | + | 1476405 - 1478927 | 91540.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.