Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sediminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sediminicola
Accession NumberCP178916.1
Gene Summary
Adenine Count
510747 bp
Thymine Count
512278 bp
Guanine Count
866983 bp
Cytosine Count
866574 bp
Genome Length
2756582 bp
Protein-coding Genes
2791 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| acetyl-coa carboxylase carboxyltransferase subunit alpha | ACMC5O_001492 | A5V3X0 | - | 1443331 - 1444272 | 33728.5 |
| tyrosine recombinase | ACMC5O_001493 | Q2NB52 | - | 1444306 - 1445190 | 32244.7 |
| hypothetical protein | ACMC5O_001494 | Not Available | - | 1445198 - 1446943 | 61548.5 |
| hypothetical protein | ACMC5O_001495 | Not Available | - | 1446933 - 1447070 | 4789.06 |
| shikimate kinase | ACMC5O_001496 | Q6NCG8 | + | 1447145 - 1447696 | 19776.7 |
| cation:proton antiporter | ACMC5O_001497 | A8AQP0 | - | 1447693 - 1449480 | 64353.7 |
| iron-sulfur cluster assembly scaffold protein | ACMC5O_001498 | Not Available | - | 1449477 - 1449902 | 14895.6 |
| cysteine--trna ligase | ACMC5O_001499 | A7HWJ0 | - | 1449899 - 1451209 | 47828.5 |
| cvpa family protein | ACMC5O_001500 | P08550 | - | 1451206 - 1451733 | 18935.7 |
| dna repair protein rada | ACMC5O_001501 | Q2YMH5 | - | 1451808 - 1453175 | 47788.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.