Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sediminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sediminicola
Accession NumberCP178916.1
Gene Summary
Adenine Count
510747 bp
Thymine Count
512278 bp
Guanine Count
866983 bp
Cytosine Count
866574 bp
Genome Length
2756582 bp
Protein-coding Genes
2791 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| m13 family metallopeptidase | ACMC5O_001462 | Q4PZA2 | - | 1416434 - 1418494 | 76458.9 |
| excinuclease abc subunit uvra | ACMC5O_001463 | O31151 | + | 1418691 - 1421675 | 108876.0 |
| duf4440 domain-containing protein | ACMC5O_001464 | Not Available | + | 1421903 - 1422454 | 20263.5 |
| cold shock domain-containing protein | ACMC5O_001465 | P0A970 | - | 1422509 - 1422715 | 7372.7 |
| cold shock domain-containing protein | ACMC5O_001466 | P0A974 | + | 1423070 - 1423276 | 7449.89 |
| hypothetical protein | ACMC5O_001467 | Not Available | + | 1423479 - 1424123 | 23305.0 |
| hypothetical protein | ACMC5O_001468 | Not Available | + | 1424663 - 1425001 | 11561.0 |
| glutathione s-transferase family protein | ACMC5O_001469 | Q9RBP4 | - | 1425052 - 1425732 | 26023.5 |
| antibiotic biosynthesis monooxygenase | ACMC5O_001470 | Not Available | - | 1425738 - 1426016 | 10481.3 |
| superoxide dismutase family protein | ACMC5O_001471 | O31851 | - | 1426086 - 1426580 | 16807.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.