Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sediminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sediminicola
Accession NumberCP178916.1
Gene Summary
Adenine Count
510747 bp
Thymine Count
512278 bp
Guanine Count
866983 bp
Cytosine Count
866574 bp
Genome Length
2756582 bp
Protein-coding Genes
2791 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| exodeoxyribonuclease vii small subunit | ACMC5O_001442 | Q9RME6 | - | 1396788 - 1397033 | 9053.58 |
| duf1013 domain-containing protein | ACMC5O_001443 | Not Available | - | 1397065 - 1397763 | 25446.0 |
| nad(p)h-quinone oxidoreductase | ACMC5O_001444 | Q53FA7 | - | 1397868 - 1398848 | 34142.4 |
| duf1192 domain-containing protein | ACMC5O_001445 | Not Available | + | 1398920 - 1399117 | 7360.8 |
| atp-dependent clp protease atp-binding subunit clpa | ACMC5O_001446 | P05444 | + | 1399267 - 1401612 | 85632.8 |
| srpbcc family protein | ACMC5O_001447 | O31806 | - | 1401680 - 1402213 | 20199.9 |
| metalloregulator arsr/smtb family transcription factor | ACMC5O_001448 | O53478 | - | 1402210 - 1402575 | 13876.6 |
| nad-dependent formate dehydrogenase | ACMC5O_001449 | P33160 | - | 1402625 - 1403845 | 44345.4 |
| s9 family peptidase | ACMC5O_001450 | P39839 | + | 1404033 - 1406141 | 74562.4 |
| m28 family metallopeptidase | ACMC5O_001451 | P80561 | + | 1406228 - 1407904 | 60603.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.