Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sediminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sediminicola
Accession NumberCP178916.1
Gene Summary
Adenine Count
510747 bp
Thymine Count
512278 bp
Guanine Count
866983 bp
Cytosine Count
866574 bp
Genome Length
2756582 bp
Protein-coding Genes
2791 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| f0f1 atp synthase subunit gamma | ACMC5O_001422 | A5V3X4 | + | 1380640 - 1381527 | 31848.3 |
| f0f1 atp synthase subunit beta | ACMC5O_001423 | Q2G5N5 | + | 1381555 - 1383084 | 53711.9 |
| glutathione s-transferase | ACMC5O_001424 | Not Available | + | 1383091 - 1383276 | 6514.7 |
| atp synthase f1 subunit epsilon | ACMC5O_001425 | Q2G5N4 | + | 1383276 - 1383536 | 9032.73 |
| cpaf family protein | ACMC5O_001426 | P9WMT2 | + | 1383647 - 1385173 | 55644.2 |
| prolyl oligopeptidase family serine peptidase | ACMC5O_001427 | P52090 | + | 1385236 - 1386000 | 27856.4 |
| duf2267 domain-containing protein | ACMC5O_001428 | Not Available | - | 1385993 - 1386469 | 17835.6 |
| Trna-val | Not Available | Not Available | + | 1386604 - 1386678 | Not Available |
| hypothetical protein | ACMC5O_001430 | Not Available | + | 1386771 - 1387493 | 25252.9 |
| response regulator | ACMC5O_001431 | Q2YIF7 | - | 1387514 - 1387891 | 13803.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.