Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sediminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sediminicola
Accession NumberCP178916.1
Gene Summary
Adenine Count
510747 bp
Thymine Count
512278 bp
Guanine Count
866983 bp
Cytosine Count
866574 bp
Genome Length
2756582 bp
Protein-coding Genes
2791 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf1285 domain-containing protein | ACMC5O_001402 | Not Available | + | 1357926 - 1358498 | 21014.7 |
| coa pyrophosphatase | ACMC5O_001403 | B7NSW2 | + | 1358495 - 1359076 | 21452.6 |
| cca trna nucleotidyltransferase | ACMC5O_001404 | Q96Q11 | + | 1359067 - 1360260 | 43913.9 |
| outer membrane beta-barrel protein | ACMC5O_001405 | Q579D9 | + | 1360376 - 1361224 | 29169.4 |
| l,d-transpeptidase family protein | ACMC5O_001406 | P22525 | - | 1361421 - 1362770 | 48351.9 |
| eal domain-containing protein | ACMC5O_001407 | P55552 | - | 1362911 - 1364572 | 60390.3 |
| dna topoisomerase iv subunit a | ACMC5O_001408 | Q59749 | - | 1364736 - 1366961 | 82437.2 |
| lysr substrate-binding domain-containing protein | ACMC5O_001409 | O69772 | - | 1367304 - 1368242 | 34655.5 |
| hypothetical protein | ACMC5O_001410 | Not Available | + | 1368397 - 1368591 | 6863.04 |
| hypothetical protein | ACMC5O_001411 | Not Available | + | 1368621 - 1368830 | 8055.48 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.