Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sediminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sediminicola
Accession NumberCP178916.1
Gene Summary
Adenine Count
510747 bp
Thymine Count
512278 bp
Guanine Count
866983 bp
Cytosine Count
866574 bp
Genome Length
2756582 bp
Protein-coding Genes
2791 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hydantoinase b/oxoprolinase family protein | ACMC5O_001352 | Q58373 | - | 1310663 - 1312537 | 68496.9 |
| hydantoinase/oxoprolinase family protein | ACMC5O_001353 | Q01262 | - | 1312537 - 1314579 | 72409.7 |
| hydroxymethylglutaryl-coa lyase | ACMC5O_001354 | A9WGE2 | - | 1314576 - 1315517 | 32765.1 |
| isochorismatase family protein | ACMC5O_001355 | Q88FY5 | + | 1315582 - 1316226 | 23227.6 |
| gntr family transcriptional regulator | ACMC5O_001356 | O05494 | - | 1316205 - 1316861 | 24510.9 |
| tonb-dependent receptor | ACMC5O_001357 | P0C2M9 | + | 1317044 - 1319605 | 91681.8 |
| 3-isopropylmalate dehydratase small subunit | ACMC5O_001358 | Q0BRH5 | - | 1319602 - 1320240 | 22999.7 |
| 3-isopropylmalate dehydratase large subunit | ACMC5O_001359 | Q0BRH4 | - | 1320237 - 1321655 | 50486.6 |
| pas domain-containing protein | ACMC5O_001360 | Q2NB98 | + | 1322127 - 1322930 | 29762.9 |
| inositol monophosphatase family protein | ACMC5O_001361 | Q6NPM8 | + | 1323014 - 1323826 | 28995.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.