Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sediminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sediminicola
Accession NumberCP178916.1
Gene Summary
Adenine Count
510747 bp
Thymine Count
512278 bp
Guanine Count
866983 bp
Cytosine Count
866574 bp
Genome Length
2756582 bp
Protein-coding Genes
2791 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| copper resistance system multicopper oxidase | ACMC5O_001322 | P59571 | - | 1286040 - 1287836 | 65885.5 |
| hypothetical protein | ACMC5O_001323 | Not Available | - | 1287920 - 1288195 | 9688.56 |
| hypothetical protein | ACMC5O_001324 | Not Available | - | 1288244 - 1288600 | 11892.8 |
| cu(i)-responsive transcriptional regulator | ACMC5O_001325 | P58379 | - | 1288597 - 1288992 | 14823.7 |
| heavy metal translocating p-type atpase | ACMC5O_001326 | Q9ZHC7 | - | 1288989 - 1291367 | 83728.7 |
| Trna-gln | Not Available | Not Available | + | 1291433 - 1291507 | Not Available |
| dopa 4,5-dioxygenase family protein | ACMC5O_001328 | P87064 | + | 1291610 - 1291948 | 12554.7 |
| branched-chain amino acid aminotransferase | ACMC5O_001329 | O86505 | - | 1291953 - 1293062 | 40519.4 |
| pyrroline-5-carboxylate reductase dimerization domain-containing protein | ACMC5O_001330 | P22008 | - | 1293090 - 1293923 | 28776.7 |
| ybjn domain-containing protein | ACMC5O_001331 | Not Available | - | 1293925 - 1294434 | 18944.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.