Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sediminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sediminicola
Accession NumberCP178916.1
Gene Summary
Adenine Count
510747 bp
Thymine Count
512278 bp
Guanine Count
866983 bp
Cytosine Count
866574 bp
Genome Length
2756582 bp
Protein-coding Genes
2791 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| l-threonylcarbamoyladenylate synthase | ACMC5O_001272 | P39153 | + | 1229893 - 1230816 | 31878.1 |
| sdr family oxidoreductase | ACMC5O_001273 | Q7BJX9 | + | 1231352 - 1232389 | 38119.0 |
| peptide-methionine (s)-s-oxide reductase msra | ACMC5O_001274 | B2VHZ5 | - | 1232393 - 1232941 | 20090.3 |
| pilz domain-containing protein | ACMC5O_001275 | Not Available | - | 1232982 - 1233683 | 25754.1 |
| response regulator | ACMC5O_001276 | L7N689 | + | 1233819 - 1234205 | 14170.2 |
| eal domain-containing protein | ACMC5O_001277 | Q55434 | + | 1234202 - 1235053 | 31982.8 |
| aldehyde dehydrogenase family protein | ACMC5O_001278 | P25795 | - | 1235012 - 1236478 | 52401.8 |
| aminotransferase | ACMC5O_001279 | P9WPZ4 | - | 1236475 - 1237608 | 40970.9 |
| caib/baif coa-transferase family protein | ACMC5O_001280 | O06543 | - | 1237626 - 1238714 | 38300.2 |
| outer membrane beta-barrel protein | ACMC5O_001281 | Not Available | - | 1238884 - 1239648 | 27108.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.