Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sediminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sediminicola
Accession NumberCP178916.1
Gene Summary
Adenine Count
510747 bp
Thymine Count
512278 bp
Guanine Count
866983 bp
Cytosine Count
866574 bp
Genome Length
2756582 bp
Protein-coding Genes
2791 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glucose-6-phosphate isomerase | ACMC5O_001242 | A5V9W3 | - | 1200543 - 1202042 | 53813.2 |
| signal peptidase i | ACMC5O_001243 | Q8L2J7 | + | 1202185 - 1202970 | 28387.1 |
| ribonuclease iii | ACMC5O_001244 | Q9Z5U2 | + | 1202967 - 1203629 | 24076.6 |
| gtpase era | ACMC5O_001245 | Q2NB82 | + | 1203626 - 1204528 | 33037.6 |
| nad-dependent deacylase | ACMC5O_001246 | Q6MJJ2 | - | 1204525 - 1205232 | 25783.7 |
| histidine kinase dimerization/phosphoacceptor domain -containing protein | ACMC5O_001247 | A0QTP6 | + | 1205439 - 1206377 | 34078.2 |
| duf72 domain-containing protein | ACMC5O_001248 | O32135 | + | 1206407 - 1207165 | 28272.4 |
| hypothetical protein | ACMC5O_001249 | Not Available | + | 1207299 - 1207739 | 16151.1 |
| hypothetical protein | ACMC5O_001250 | Not Available | + | 1207834 - 1208268 | 16457.6 |
| 4-hydroxy-tetrahydrodipicolinate reductase | ACMC5O_001251 | Q5NPM9 | + | 1208329 - 1209039 | 24760.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.