Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sediminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sediminicola
Accession NumberCP178916.1
Gene Summary
Adenine Count
510747 bp
Thymine Count
512278 bp
Guanine Count
866983 bp
Cytosine Count
866574 bp
Genome Length
2756582 bp
Protein-coding Genes
2791 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxythreonine-4-phosphate dehydrogenase pdxa | ACMC5O_001172 | Q5NMX3 | + | 1133774 - 1134778 | 35173.0 |
| duf1428 domain-containing protein | ACMC5O_001173 | Q2N8W9 | + | 1134775 - 1135603 | 29580.3 |
| hypothetical protein | ACMC5O_001174 | Not Available | - | 1135607 - 1136101 | 17536.2 |
| rsmb/nop family class i sam-dependent rna methyltransferase | ACMC5O_001175 | Q57J62 | - | 1136127 - 1137302 | 42476.6 |
| imp dehydrogenase | ACMC5O_001176 | Q9KH33 | - | 1137306 - 1138784 | 51745.2 |
| nudix domain-containing protein | ACMC5O_001177 | P96590 | - | 1138827 - 1139285 | 17290.9 |
| coa ester lyase | ACMC5O_001178 | A4WNM9 | - | 1139290 - 1140075 | 28071.6 |
| spfh domain-containing protein | ACMC5O_001179 | P0AA55 | + | 1140164 - 1141171 | 36439.1 |
| nfed family protein | ACMC5O_001180 | P0AAS3 | + | 1141171 - 1141626 | 16265.0 |
| duf885 domain-containing protein | ACMC5O_001181 | Not Available | + | 1141638 - 1143482 | 67373.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.