Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sediminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sediminicola
Accession NumberCP178916.1
Gene Summary
Adenine Count
510747 bp
Thymine Count
512278 bp
Guanine Count
866983 bp
Cytosine Count
866574 bp
Genome Length
2756582 bp
Protein-coding Genes
2791 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| asp-trna(asn)/glu-trna(gln) amidotransferase subunit gatc | ACMC5O_001122 | A5V3V1 | - | 1077176 - 1077463 | 10505.5 |
| simpl domain-containing protein | ACMC5O_001123 | Q44642 | + | 1077743 - 1078423 | 24225.9 |
| hypothetical protein | ACMC5O_001124 | Not Available | + | 1079351 - 1079509 | 5890.92 |
| hwe histidine kinase domain-containing protein | ACMC5O_001125 | B2SB67 | - | 1079678 - 1080565 | 31732.8 |
| duf3089 domain-containing protein | ACMC5O_001126 | Not Available | + | 1081333 - 1082436 | 40078.6 |
| holliday junction resolvase ruvx | ACMC5O_001127 | Q1GUM9 | + | 1082433 - 1082903 | 16864.3 |
| aspartate carbamoyltransferase catalytic subunit | ACMC5O_001128 | Q1GUN0 | + | 1082915 - 1083805 | 32286.7 |
| tetratricopeptide repeat protein | ACMC5O_001129 | B8GX61 | - | 1083806 - 1085092 | 43888.3 |
| hypothetical protein | ACMC5O_001130 | Not Available | - | 1085132 - 1085785 | 23134.2 |
| para family protein | ACMC5O_001131 | Q72H90 | - | 1085799 - 1086512 | 25281.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.