Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sediminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sediminicola
Accession NumberCP178916.1
Gene Summary
Adenine Count
510747 bp
Thymine Count
512278 bp
Guanine Count
866983 bp
Cytosine Count
866574 bp
Genome Length
2756582 bp
Protein-coding Genes
2791 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c-type biogenesis protein | ACMC5O_001092 | P45405 | - | 1047609 - 1048016 | 15110.4 |
| dsbe family thiol:disulfide interchange protein | ACMC5O_001093 | P36893 | - | 1048013 - 1048540 | 18957.3 |
| heme lyase ccmf/nrfe family subunit | ACMC5O_001094 | P45404 | - | 1048537 - 1050450 | 67934.4 |
| cytochrome c maturation protein ccme | ACMC5O_001095 | Q1GSZ2 | - | 1050447 - 1050896 | 16210.0 |
| hypothetical protein | ACMC5O_001096 | Not Available | - | 1050893 - 1051024 | 4650.68 |
| heme abc transporter permease ccmc | ACMC5O_001097 | P30962 | - | 1051021 - 1051737 | 25606.7 |
| glu/leu/phe/val dehydrogenase dimerization domain-containing protein | ACMC5O_001098 | P13154 | - | 1051746 - 1052795 | 36639.7 |
| Trna-his | Not Available | Not Available | + | 1052828 - 1052904 | Not Available |
| crp/fnr family transcriptional regulator | ACMC5O_001100 | Q08530 | + | 1053104 - 1053823 | 26811.2 |
| Trna-val | Not Available | Not Available | + | 1053852 - 1053926 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.