Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sediminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sediminicola
Accession NumberCP178916.1
Gene Summary
Adenine Count
510747 bp
Thymine Count
512278 bp
Guanine Count
866983 bp
Cytosine Count
866574 bp
Genome Length
2756582 bp
Protein-coding Genes
2791 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| proline--trna ligase | ACMC5O_001082 | A5V8U0 | - | 1039765 - 1041087 | 49397.8 |
| hypothetical protein | ACMC5O_001083 | Not Available | + | 1041489 - 1041722 | 8358.08 |
| wgxxgxxg-cterm domain-containing protein | ACMC5O_001084 | Not Available | + | 1041747 - 1042043 | 9692.75 |
| Trna-met | Not Available | Not Available | + | 1042057 - 1042133 | Not Available |
| duf3775 domain-containing protein | ACMC5O_001086 | Not Available | + | 1042267 - 1042692 | 15391.5 |
| 2'-5' rna ligase family protein | ACMC5O_001087 | Not Available | - | 1042689 - 1043192 | 18456.3 |
| prc-barrel domain-containing protein | ACMC5O_001088 | Not Available | - | 1043177 - 1043710 | 18764.6 |
| potassium transporter kup | ACMC5O_001089 | A5V804 | - | 1043763 - 1045628 | 67557.4 |
| alanine dehydrogenase | ACMC5O_001090 | E1V931 | + | 1045895 - 1047001 | 38739.9 |
| tetratricopeptide repeat protein | ACMC5O_001091 | P45399 | - | 1046980 - 1047612 | 22488.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.