Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sediminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sediminicola
Accession NumberCP178916.1
Gene Summary
Adenine Count
510747 bp
Thymine Count
512278 bp
Guanine Count
866983 bp
Cytosine Count
866574 bp
Genome Length
2756582 bp
Protein-coding Genes
2791 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| d-alanyl-d-alanine carboxypeptidase family protein | ACMC5O_001042 | P44466 | - | 994489 - 995664 | 41884.5 |
| lytic murein transglycosylase | ACMC5O_001043 | P41052 | - | 995738 - 996868 | 40882.8 |
| Trna-ser | Not Available | Not Available | + | 996987 - 997076 | Not Available |
| hypothetical protein | ACMC5O_001045 | Not Available | - | 997097 - 997738 | 23450.2 |
| tonb-dependent receptor plug domain-containing protein | ACMC5O_001046 | Not Available | + | 997960 - 1000134 | 79786.8 |
| acyl-coa dehydrogenase | ACMC5O_001047 | Q54R47 | + | 1000224 - 1001399 | 42756.3 |
| lema family protein | ACMC5O_001048 | A8AVK0 | + | 1001455 - 1002027 | 20987.3 |
| duf2207 domain-containing protein | ACMC5O_001049 | P45848 | + | 1002027 - 1003931 | 68161.7 |
| gnat family n-acetyltransferase | ACMC5O_001050 | Q9HX72 | - | 1003935 - 1004420 | 17759.0 |
| 50s ribosomal protein l31 | ACMC5O_001051 | Q1GRR1 | - | 1004502 - 1004732 | 8333.79 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.