Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sediminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sediminicola
Accession NumberCP178916.1
Gene Summary
Adenine Count
510747 bp
Thymine Count
512278 bp
Guanine Count
866983 bp
Cytosine Count
866574 bp
Genome Length
2756582 bp
Protein-coding Genes
2791 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rna chaperone hfq | ACMC5O_001032 | Q0APP7 | + | 986060 - 986548 | 17858.8 |
| gtpase hflx | ACMC5O_001033 | A0L4B2 | + | 986545 - 987846 | 47860.9 |
| nucleoside triphosphate pyrophosphohydrolase | ACMC5O_001034 | P0AEY4 | - | 987825 - 988601 | 28863.0 |
| tigr02281 family clan aa aspartic protease | ACMC5O_001035 | P29938 | - | 988651 - 989238 | 21506.4 |
| tigr02281 family clan aa aspartic protease | ACMC5O_001036 | P29938 | - | 989238 - 989819 | 20963.3 |
| mbl fold metallo-hydrolase | ACMC5O_001037 | Q7MUY1 | - | 989819 - 990583 | 28212.6 |
| tatd family hydrolase | ACMC5O_001038 | P44718 | - | 990580 - 991359 | 28145.7 |
| methionine--trna ligase | ACMC5O_001039 | P59078 | - | 991356 - 992864 | 56327.7 |
| dna polymerase iii subunit delta' | ACMC5O_001040 | P52024 | - | 992898 - 993869 | 34847.9 |
| dtmp kinase | ACMC5O_001041 | A5V3I6 | - | 993866 - 994492 | 22600.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.