Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sediminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sediminicola
Accession NumberCP178916.1
Gene Summary
Adenine Count
510747 bp
Thymine Count
512278 bp
Guanine Count
866983 bp
Cytosine Count
866574 bp
Genome Length
2756582 bp
Protein-coding Genes
2791 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| class i sam-dependent rna methyltransferase | ACMC5O_001002 | Q9X3W2 | + | 959016 - 960188 | 42118.4 |
| mapeg family protein | ACMC5O_001003 | Not Available | - | 960203 - 960649 | 16374.7 |
| deoxyhypusine synthase | ACMC5O_001004 | A9KDQ8 | - | 960711 - 961793 | 39823.3 |
| type iii plp-dependent enzyme | ACMC5O_001005 | O50657 | - | 961914 - 963137 | 44100.6 |
| threonine/serine dehydratase | ACMC5O_001006 | A2XWA9 | + | 963329 - 964276 | 33351.9 |
| hypothetical protein | ACMC5O_001007 | Not Available | - | 964273 - 964524 | 9137.91 |
| hypothetical protein | ACMC5O_001008 | Not Available | + | 964603 - 964746 | 5079.73 |
| alpha/beta hydrolase | ACMC5O_001009 | Q9ZD73 | - | 964750 - 965421 | 24632.7 |
| aminotransferase class v-fold plp-dependent enzyme | ACMC5O_001010 | Q01179 | + | 965533 - 966609 | 37249.2 |
| cysteine desulfurase family protein | ACMC5O_001011 | Q1RHY6 | + | 966606 - 967721 | 39614.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.