Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Flammeovirgaceae
Genus
Flammeovirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Flammeovirgaceae |
| Genus | Flammeovirga |
| Species | Flammeovirga yaeyamensis |
| Strain | IR25-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Flammeovirga yaeyamensis IR25-3
Accession NumberCP076132.1
Gene Summary
Adenine Count
1702145 bp
Thymine Count
1696599 bp
Guanine Count
899268 bp
Cytosine Count
892998 bp
Genome Length
5191010 bp
Protein-coding Genes
4012 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| orotidine-5'-phosphate decarboxylase | KMW28_08605 | A6KWL1 | - | 2208100 - 2208915 | 30215.1 |
| ydiu family protein | KMW28_08610 | A5FG48 | - | 2209052 - 2210608 | 59421.1 |
| glycogen debranching protein | KMW28_08615 | Not Available | + | 2210821 - 2213499 | 100542.0 |
| phytoene desaturase | KMW28_08620 | A0A0A1GKA2 | + | 2213782 - 2215272 | 56688.6 |
| squalene/phytoene synthase family protein | KMW28_08625 | P54977 | + | 2215295 - 2216131 | 32710.5 |
| isopentenyl-diphosphate delta-isomerase | KMW28_08630 | Q5NWG5 | + | 2216133 - 2216660 | 19816.6 |
| phytoene desaturase | KMW28_08635 | L7WC64 | + | 2216657 - 2218105 | 55197.9 |
| carotenoid biosynthesis protein | KMW28_08640 | Not Available | + | 2218098 - 2218766 | 25658.2 |
| sterol desaturase family protein | KMW28_08645 | P54973 | + | 2218772 - 2219272 | 20005.5 |
| lycopene cyclase domain-containing protein | KMW28_08650 | Not Available | + | 2219256 - 2219921 | 25940.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.