Clostridium saccharoperbutylacetonicum N1-4(HMT)

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Clostridiaceae

Genus

Clostridium

Description

Clostridium saccharoperbutylacetonicum N1-4(HMT) is a bacterium characterized by its unique metabolic capabilities. It possesses two replicons, which are essential for its genetic stability and replication processes. The organism has been documented in two accessions: CP004121.1 and CP004122.1, which provide nucleotide sequences that are crucial for understanding its genetic makeup. This bacterium is notable for its ability to produce solvents, particularly butanol, acetone, and ethanol, through a fermentation process. Such metabolic traits make it of significant interest in biotechnology, particularly in the production of biofuels and solvents from renewable biomass sources. The capacity to convert sugars into these solvents positions C. saccharoperbutylacetonicum as a potential candidate for sustainable industrial applications. In terms of ecological insights, C. saccharoperbutylacetonicum N1-4(HMT) plays a role in the degradation of organic materials, contributing to the recycling of nutrients in its environment. Its fermentation process not only aids in energy production but also influences the microbial community structure by providing substrates for other microorganisms. The ability to thrive in anaerobic conditions further highlights its adaptability and ecological significance within various environments, particularly in agricultural and waste management contexts. Overall, this bacterium represents a valuable asset in both ecological and industrial microbiology domains.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyClostridiaceae
GenusClostridium
SpeciesClostridium saccharoperbutylacetonicum
StrainN1-4(HMT)

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Clostridium saccharoperbutylacetonicum N1-4(HMT)


Gene Summary

Adenine Count

2326767 bp

Thymine Count

2274360 bp

Guanine Count

986533 bp

Cytosine Count

942597 bp

Genome Length

6530257 bp

Protein-coding Genes

5601 genes

Non-Coding Genes

228 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cysteine synthase cyskCspa_c13860Q7DDL5Negative1520502 - 152148535619.7
putative glutathione s-transferaseCspa_c13870P42620Negative1521657 - 152263437796.8
oligopeptide-binding protein appaCspa_c13880P42061Positive1522932 - 152450058436.3
oligopeptide transport system permease protein appbCspa_c13890P42062Positive1524584 - 152553735027.4
oligopeptide transport system permease protein oppcCspa_c13900P42063Positive1525543 - 152639431124.8
oligopeptide transport atp-binding protein oppdCspa_c13910P24136Positive1526399 - 152736735615.1
oligopeptide transport atp-binding protein appfCspa_c13920P42065Positive1527394 - 152836236015.9
peptidase t-like proteinCspa_c13930P54542Positive1528506 - 152962440688.4
acetyltransferase, gnat familyCspa_c13940P37500Positive1529881 - 153031216543.8
methionine synthase vitamin-b12 independentCspa_c13950P42319Positive1530376 - 153149743017.9

Displaying genes 1481 – 1490 of 5935 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

243 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001661Cu(2+)CuChemical structure of Cu(2+)7440-50-8
Average63.546Da
Monoisotopic62.929601079Da
BASm0001921(S)-3-methyl-2-oxopentanoateC6H9O3Chemical structure of (S)-3-methyl-2-oxopentanoate1460-34-0
Average129.1339Da
Monoisotopic129.0551692Da
BASm0002143menaquinone-7C46H64O2Chemical structure of menaquinone-7Not available
Average648.9992Da
Monoisotopic648.4906313Da
BASm0002780orotidine 5'-phosphateC10H10N2O11PNot available2149-82-8
Average365.168Da
Monoisotopic365.003866888Da
BASm0003070D-methionineC5H11NO2SChemical structure of D-methionine348-67-4
Average149.211Da
Monoisotopic149.0510493Da
BASm00031102-dehydro-3-deoxy-D-galactonateC6H10O6Chemical structure of 2-dehydro-3-deoxy-D-galactonateNot available
Average178.14Da
Monoisotopic178.0477381Da
BASm0003208L-2-acetamido-6-oxoheptanedioateC9H11NO6Chemical structure of L-2-acetamido-6-oxoheptanedioateNot available
Average229.189Da
Monoisotopic229.059734238Da

Displaying 1–10 of 243 metabolites

Health Effects

No health effects information available for this bacterium.