Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| is481-like element is481 family transposase | LK440_10575 | P37007 | + | 2196169 - 2197119 | 35659.8 |
| p-ii family nitrogen regulator | LK440_10580 | P0AC57 | + | 2197367 - 2197705 | 12068.8 |
| ammonium transporter | LK440_10585 | P69680 | + | 2197753 - 2198991 | 43082.0 |
| abc transporter atp-binding protein | LK440_10590 | P21630 | - | 2199368 - 2200099 | 26159.1 |
| abc transporter atp-binding protein | LK440_10595 | P21629 | - | 2200096 - 2200902 | 29109.4 |
| abc transporter atp-binding protein | LK440_10600 | P21628 | - | 2200899 - 2201975 | 38335.4 |
| branched-chain amino acid abc transporter permease | LK440_10605 | P0A2J2 | - | 2201972 - 2202901 | 32190.8 |
| branched-chain amino acid abc transporter substrate-binding protein | LK440_10610 | Q8FYS6 | - | 2203020 - 2204165 | 40931.8 |
| trifunctional transcriptional regulator/proline dehydrogenase/l-glutamate gamma-semialdehyde dehydrogenase | LK440_10615 | O52485 | - | 2204391 - 2208197 | 136875.0 |
| pqic family protein | LK440_10620 | Not Available | - | 2208330 - 2208995 | 23215.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
