Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lipopolysaccharide transport periplasmic protein lpta | D560_1833 | P0ADV3 | - | 1720672 - 1721280 | 21839.8 |
| lipopolysaccharide-assembly, lptc-related family protein | D560_1834 | Not Available | - | 1721277 - 1721900 | 22908.3 |
| 3-deoxy-d-manno-octulosonate 8-phosphate phosphatase, yrbi family protein | D560_1835 | Q8ZB47 | - | 1721946 - 1722467 | 18634.6 |
| sugar isomerase, kpsf/gutq family protein | D560_1836 | Q9HVW0 | - | 1722506 - 1723492 | 34421.6 |
| phosphoribosylglycinamide formyltransferase 2 | D560_1837 | Q2KUD7 | + | 1723670 - 1724824 | 41022.2 |
| tonb-dependent receptor plug domain protein | D560_1838 | Q8X7W7 | + | 1724968 - 1725861 | 31660.5 |
| tonb dependent receptor family protein | D560_1839 | Q9HUX3 | + | 1725924 - 1726988 | 38953.2 |
| marr family protein | D560_1840 | Q58958 | + | 1727193 - 1727765 | 21886.4 |
| bacterial cytochrome ubiquinol oxidase family protein | D560_1841 | Q09049 | + | 1727864 - 1729441 | 58500.0 |
| cytochrome d ubiquinol oxidase, subunit ii | D560_1842 | P45020 | + | 1729456 - 1730607 | 41519.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
