Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Bordetella holmesii 5589, F5101
Accession NumberCP007494.1
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| pepsy-associated tm helix family protein | D560_1633 | P42514 | - | 1535723 - 1537204 | 54318.8 |
| fecr family protein | D560_1634 | P23485 | - | 1537332 - 1538363 | 37417.5 |
| rna polymerase sigma factor, sigma-70 family protein | D560_1635 | P23484 | - | 1538437 - 1538991 | 20347.4 |
| bacterial regulatory helix-turn-helix, lysr family protein | D560_1636 | P52661 | - | 1539580 - 1540497 | 33654.2 |
| pyridoxal phosphate biosynthetic pdxa family protein | D560_1637 | Q9I1Q5 | + | 1540641 - 1541675 | 36556.0 |
| mandelate racemase / muconate lactonizing enzyme, c-terminal domain protein | D560_1638 | A4FLW9 | + | 1541705 - 1542877 | 44214.1 |
| l-2-keto-3-deoxyarabonate dehydratase | D560_1639 | Q1JUQ0 | + | 1542883 - 1543812 | 34039.1 |
| hypothetical protein | D560_1640 | Not Available | + | 1543875 - 1544027 | 5112.17 |
| tripartite tricarboxylate transporter receptor family protein | D560_1641 | B3EWP1 | + | 1544037 - 1544876 | 28070.0 |
| type i phosphodiesterase / nucleotide pyrophosphatase family protein | D560_1642 | O69787 | + | 1544873 - 1546336 | 53531.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
