Bordetella holmesii 5589, F5101

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Alcaligenaceae

Genus

Bordetella

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyAlcaligenaceae
GenusBordetella
SpeciesBordetella holmesii
Strain5589, F5101

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bordetella holmesii 5589, F5101

Accession NumberCP007494.1

Gene Summary

Adenine Count

688505 bp

Thymine Count

691897 bp

Guanine Count

1157119 bp

Cytosine Count

1162153 bp

Genome Length

3699674 bp

Protein-coding Genes

3912 genes

Non-Coding Genes

63 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
ribosomal protein s12 methylthiotransferase rimoD560_1173Q7WQS2+1114249 - 111514233185.8
tram domain proteinD560_1174Q7WQS2+1115152 - 111548712265.2
bacterial regulatory helix-turn-helix, lysr family proteinD560_1175P52696-1115526 - 111641632536.8
succinate-semialdehyde dehydrogenaseD560_1176Q88RC0+1116604 - 111807352049.4
fad binding domain proteinD560_1177Q988C9+1118081 - 111841311573.6
gmc oxidoreductase family proteinD560_1178A7X6Z3+1118443 - 111943536193.8
periplasmic binding domain proteinD560_1179Q9HUQ0+1119498 - 111991714340.0
hypothetical proteinD560_1180Not Available+1119928 - 112050621388.6
had hydrolase, ia, variant 1 family proteinD560_1181Q55039+1120503 - 112113523200.1
pyridoxamine 5'-phosphate oxidase, fmn-binding family proteinD560_1182Not Available+1121148 - 112177422746.2

Displaying genes 1171 – 1180 of 11230 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites