Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | K8M09_03290 | Not Available | - | 677406 - 677705 | 10154.0 |
| nucleoside deaminase | K8M09_03295 | A9CK16 | - | 677702 - 678151 | 16011.0 |
| pseudouridine synthase | K8M09_03300 | Q4UL59 | + | 678222 - 680216 | 72543.4 |
| 16s rrna (guanine(966)-n(2))-methyltransferase rsmd | K8M09_03305 | P0ADY0 | + | 680223 - 680783 | 20216.1 |
| patatin-like phospholipase family protein | K8M09_03310 | P9WIY8 | + | 680811 - 681680 | 30346.1 |
| monovalent cation:proton antiporter-2 (cpa2) family protein | K8M09_03315 | P44933 | - | 681677 - 683464 | 64066.6 |
| tldd/pmba family protein | K8M09_03320 | P0AFK1 | + | 683575 - 684921 | 46661.0 |
| 3'(2'),5'-bisphosphate nucleotidase cysq | K8M09_03325 | Q92M71 | + | 684926 - 685732 | 28341.6 |
| duf4170 domain-containing protein | K8M09_03330 | Not Available | + | 685824 - 686060 | 8914.61 |
| lipid iv(a) 3-deoxy-d-manno-octulosonic acid transferase | K8M09_03335 | P0AC77 | + | 686174 - 687490 | 48438.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.