Shinella zoogloeoides 1-16M

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Shinella

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusShinella
SpeciesShinella zoogloeoides
Strain1-16M

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Shinella zoogloeoides 1-16M

Accession NumberCP086610.1

Gene Summary

Adenine Count

713258 bp

Thymine Count

704761 bp

Guanine Count

1279043 bp

Cytosine Count

1294829 bp

Genome Length

3991891 bp

Protein-coding Genes

3764 genes

Non-Coding Genes

168 genes

# of Chromosomes/Plasmids

5

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
urocanate hydrataseK8M09_10780Q89GV4-2161743 - 216341059745.0
tfox/sxy family proteinK8M09_10785Not Available-2163438 - 216376711858.5
duf917 domain-containing proteinK8M09_10790Not Available-2163781 - 216487237419.1
zn-dependent hydrolaseK8M09_10795Q9F464-2164872 - 216614944566.3
amidohydrolase family proteinK8M09_10800Q1AS71-2166146 - 216752849058.5
aromatic amino acid lyaseK8M09_10805A9H863-2167541 - 216907954264.5
lysr family transcriptional regulatorK8M09_10810P27102+2169251 - 217040841013.5
glxa family transcriptional regulatorK8M09_10815Q9HTH5-2170405 - 217137936525.1
3-keto-5-aminohexanoate cleavage proteinK8M09_10820Q8RHX2+2171494 - 217240832568.4
carnitine 3-dehydrogenaseK8M09_10825Q92NF5+2172514 - 217401054477.5

Displaying genes 2241 – 2250 of 4728 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites